Financed projects
Funding sources
- National Research Agency
(ANR) [web]. Projects: RESET, TOXOHADAC, RNAGermSilence, ProFi, COPDETOX, GRAL, DYNOTEP, NEMS-MS, FungiBet, Pandoravirus, REGtheREG - Carnot : Projects: NEMS-MS
- CEA programs & scholarships : Projects: COPDETOX, NRBC, Carbonomics, HistPTMs, WilProj
- European Research Council (ERC) [web]. Projects: NEMS-MS
- Foundation for Medical Research (FRM) [FR web]. Projects: INTACT
- French Bioinformatics Institute (IFB) [FR web]. Projects: ProteoRE
- University Grenoble Alps (UGA) [web]. Projects : NASH
- Sanofi [web]
Carbonomics: [FR] Développement des protocoles innovants pour l’exploration clinico-biologique de patients atteints de glioblastomes et l’amélioration du guidage thérapeutique [CEA, inter DRT/DRF coupling program, 2014-2015]
Main collaborators:
EDyP correspondent: V. Brun
ProteoRE: Design and implementation of a user-oriented web-based platform for MS-based proteomics data exploration. [IFB 2015, 2016-2018?]
Main collaborators:
EDyP correspondent: Y. Vandenbrouck
NASH: Evaluation of plasma biomarkers for differential steatosis versus non alcoholic hepatic steatosis diagnosis. [UGA Agir 2016]
Main collaborators:
EDyP correspondent: V. Brun
INTACT : High performance mass spectrometry for top-down protein analysis. [FRM, Large Equipments 2012, 2013-2016]
Main collaborators:
EDyP correspondent: C. Masselon
FungiBet : Investigating a potential new antifungal drug target: Structure, function and inhibition of fungal BET bromodomains [ANR, Generic 2014, 2015-2017]
Main collaborators:
EDyP correspondent: J. Govin
Pandoravirus : Functional and molecular characterization of Pandoraviruses [ANR, Edition 2013, 2014-2018]
Main collaborators:
EDyP correspondent: Y. Couté
REGtheREG : Regulating the Regulators: post-translational modifications of plant RNA silencing factors [ANR, Generic 2014, 2014-2018]
Main collaborators:
EDyP correspondent: D. Pflieger
HistPTMs : Discovery and characterization of new histones post-translational modifications [CEA scholarship Irtelis 2015, 2015-2018]
Main collaborators:
PhD : S. El Kennani; EDyP correspondent: D. Pflieger
WilProj : Translational proteomic analysis of the Wilson disease physiopathology [CEA scholarship Irtelis 2015, 2015-2018]
Main collaborators:
PhD : M. Lacombe; EDyP correspondent: V. Brun
RESET: Arrest and restart of the gene expression machinery in bacteria: from mathematical models to biotechnological applications [ANR, « Investissement d’Avenir » Bioinformatics-2011 edition, 2012-16]
Main collaborators:
- H. De jong, INRIA, Grenoble [web]
- J. Geiselmann, LAPM, La Tronche [web]
- I. Mihalcescu, LIPHY, Grenoble [web]
- O. Martin, Génétique Végétale du Moulon [web]
- J-L. Gouze, INRIA Sophia-Antipolis – Méditerranée [web]
- R. Figge, Metabolic Explorer SA [web]
EDyP correspondent: C. Bruley / M. Ferro
TOXOHDAC: The HDAC3 regulatory network defines a new epigenetic path to explore Toxoplasma gondii differentiation and pathogenesis [ANR, blank program 2012 edition, 48 months]
Main collaborators:
- M-A. Hakimi, CNRS, UMR5163-LAPM, Grenoble (coordinator)
- H. Belrhali, EMBL Grenoble
EDyP correspondent: Y. Couté
RNAGermSilence: RNA, heterochromatin and germ cell differentiation: RNA-driven epigenetic gene silencing [ANR, blank program 2013 edition, 48 months]
Main collaborators:
- A. Verdel, INSERM/UJF U23, Grenoble (coordinator)
- R. Pillai, EMBL Grenoble
EDyP correspondent: Y. Couté
PRIME-XS: Proteomics Research Infrastructure Maximising knowledge EXchange and access (XS) [7th Framework Programme of the European Union, Contract no. 262067, 2011-15]
All partners in this Infrastructure Project
- Utrecht University (coordinator), The Netherlands
- Flemish Institute for Biotechnology, Belgium
- University of Zürich, Switzerland
- ETH Zürich, Switzerland
- University of Copenhagen, Denmark
- CRG Barcelona, Spain
- University of Cambridge, United Kingdom
- IMP, Vienna, Austria
- CEA, Grenoble, France (EDyP)
- Eberhard Karls Universität Tübingen, Germany
- EMBL Outstation, EBI, United Kingdom
- Max Planck Gesellschaft, Germany
EDyP correspondent: J. Garin* / C. Bruley
website at : http://www.primexs.eu/
*head of the IRTSV institute (CEA/DSV/IRTSV)
ProFi: Proteomics French Infrastructure [ANR, Infrastructures Nationales de Biologie et Santé, 2012-19]
All partners in this Infrastructure Project
- B. Monsarrat, O. Schiltz, IPBS/PMSB, Toulouse [web]
- A. Van Dorsselaer, C. Carapito, Institut Hubert Curien/ LSMBO, Strasbourg [web]
- M. Ferro, DSV/IRTSV/BGE/EDyP, Grenoble
EDyP correspondent: J. Garin* / M. Ferro
website at : http://www.profiproteomique.fr/
*head of the IRTSV institute (CEA/DSV/IRTSV)
COPDETOX: Copper chelators targeted at the liver: an innovative treatment of hepatic copper overload [ANR, emergence 2011; CEA, Technologies for Health; 2012-14]
Main collaborators:
- P. Delangle, CEA/DSM/INAC/SCIB http://inac.cea.fr/scib/ Institut Nanosciences et Cryogénie
- E. Minz CEA/DSV/iRTSV/LCBM http://www-dsv.cea.fr/dsv/instituts/institut-de-recherches-en-technologies-et-sciences-pour-le-vivant-irtsv/unites/chimie-et-biologie-des-metaux-cbm Chimie et Biologie des Métaux
EDyP correspondent: M. Jaquinot
GRAL: Grenoble Alliance for Integrated Structural Cell Biology (Axis 2: The chloroplast compartment and its substructures) [ANR, call Labex, 2012-15]
http://www.agence-nationale-recherche.fr/investissementsdavenir/AAP-LABEX-2011.html
Main collaborators:
- N. Rolland, CEA, IRTSV, LPCV http://www-dsv.cea.fr/dsv/instituts/institut-de-recherches-en-technologies-et-sciences-pour-le-vivant-irtsv/unites/physiologie-cellulaire-vegetale-pcv/bienvenue
EDyP correspondent: M. Ferro
website at : http://www.labex-gral.fr/
DYNOTEP – DYNamics Of The Endocytic Proteome: a systemic perspective on trafficking and maturation [ANR, Progamme Blanc SVSE6 – 01/2013]
Main collaborators:
- Laurence Aubry [PI], CEA, DSV, iRTSV/BGE, Grenoble
- Alahme Douzal, UJF, AMA/LIG Grenoble
EDyP correspondent: C. Masselon
NEMS-MS – Nanosystem-based Mass Spectrometry [ANR, ASTRID – 01/2013, IDEAS ERC 2013]
Main collaborators:
- Sébastien Hentz [PI], CEA, DRT, LETI, Grenoble
- Richard Cole, UPMC, Paris VI
EDyP correspondent: C. Masselon
DETOXMET: Evaluation d’un candidat médicament pour traiter les surcharges en métaux, Title in English, please [GRAVIT, 2012-12]
Main collaborators:
- P. Delangle, INAC http://inac.cea.fr/
- E. Minz , CEA, IRTSV, LCBM http://www-dsv.cea.fr/dsv/instituts/institut-de-recherches-en-technologies-et-sciences-pour-le-vivant-irtsv/unites/chimie-et-biologie-des-metaux-cbm
EDyP correspondent: M. Jaquinot
NRBC: Multiplex quantification of enterotoxins and ricin in complex medium by mass spectrometry [interministerial/ CEA R&D program of fight against terrorism, 2012-13, 2015]
Main collaborators:
- F. Becher, CEA, iBiTEC-s/SPI/LEMM http://www-dsv.cea.fr/institutes/institute-of-biology-and-technology-saclay-ibitec-s/units/pharmacology-and-immunoanalysis-spi/drug-metabolism-research-laboratory-lemm
EDyP correspondent: V. Brun